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PubMed News (NIH) 10/19/2019
Contributor : Yan Fang Series Type : Expression profiling by high throughput sequencing Organism : Mactra quadrangularis. RNA-seq provided a general overview of the gene expression profiles of the digestive glands of Mactra veneriformis exposed to 2, 2′,4,4′-tetrabromodiphenyl ether (BDE-47, a type of widely used brominated flame retardants).
PubMed News (NIH) 10/19/2019
Contributors : J Klibi ; S Li ; L Amable ; C Joseph ; S Brunet ; M Delord ; V Parietti ; J Jaubert ; J Marie ; S Karray ; G Eberl ; B Lucas ; A Toubert ; K Benlagha Series Type : Expression profiling by array Organism : Mus musculus. Invariant natural killer T cells (iNKT) expressing the retinoic acid receptor-related orphan receptor γt (RORγt) and producing IL-17 represent a minor subset of CD1d-restricted iNKT cells (iNKT17) in C57BL/6J (B6) mice.
PubMed News (NIH) 10/19/2019
Contributors : Zhang Yong ; Zhou Chuan ; Liu Xin ; Zhang Jingcheng Series Type : Expression profiling by high throughput sequencing Organism : Bos taurus. We hypothesized aberrant transcriptional silence was existed in bovine clone reprogramming as well as abnormal transcriptional activation and the result of RNA-seq confirmed this hypothesis.
PubMed News (NIH) 10/19/2019
Contributors : Li Wang ; Lu Wang Series Type : Expression profiling by high throughput sequencing Organism : Ginkgo biloba. We sequenced mRNA from Ginkgo biloba leaves grown at different developmental stages using the Illumina HiSeq4000 platform to generate the transcriptome dynamics that may serve as a gene expression profile blueprint for different response patterns during autumn leaf senescence and coloration.
PubMed News (NIH) 10/19/2019
Contributors : Terry Gaasterland ; Albert La Spada ; Chenchen Niu ; Colleen Stoyas Series Type : Expression profiling by high throughput sequencing Organism : Mus musculus. Atxn7 repeat expansion mutations lead to ataxia phenotypes. Total cerebellar RNA from mice with normal Atxn7 repeat lengths and expanded repeats (92 CAG) were sequenced to compared gene expression changes at 12 and 29 weeks of age in normal vs. expanded repeats.
PubMed News (NIH) 10/19/2019
Contributors : Yongpeng Shang ; Xiaofei Wang ; Di Qu Series Type : Expression profiling by high throughput sequencing Organism : Staphylococcus aureus. Purpose: The goals of this study are to compare the wild type and phoU1 or phoU2 gene knock out transcriptome profiling (RNA-seq) to analysis gene expression change Methods: Samples was prepared according to the Illumina RNA Sequencing Sample Preparation Guide.
PubMed News (NIH) 10/19/2019
Contributors : Shinya Tanaka ; Wataru Ise Series Type : Expression profiling by high throughput sequencing Organism : Mus musculus. We report the global gene expression in Tet2/Tet3-sufficient and -deficient B cell subsets. We found an alteration of multiple gene expressions in the absence of Tet2 and Tet3 in B cells. This study provides a basis for the comprehensive understanding of Tet function in B cells.
PubMed News (NIH) 10/19/2019
Contributors : Makoto Ohno ; Juntaro Matsuzaki ; Junpei Kawauchi ; Yoshiaki Aoki ; Junichiro Miura ; Satoko Takizawa ; Ken Kato ; Hiromi Sakamoto ; Yuko Matsushita ; Masamichi Takahashi ; Yasuji Miyakita ; Koichi Ichimura ; Yoshitaka Narita ; Takahiro Ochiya Series Type : Non-coding RNA profiling by array Organism : Homo sapiens. A serum miRNA combination could be a powerful classifier for the detection of patients with brain tumors.
PubMed News (NIH) 10/19/2019
Contributors : Hiroyuki Hosokawa ; Maile Romero-Wolf ; Qi Yang ; Yasutaka Motomura ; Yoram Groner ; Kazuyo Moro ; Tomoaki Tanaka ; Ellen V Rothenberg ; Hiroyuki Hosokawa Series Type : Expression profiling by high throughput sequencing ; Genome binding/occupancy profiling by high throughput sequencing Organism : Mus musculus. The zinc finger transcription factor, Bcl11b, is expressed in T cells and group 2 innate lymphoid cells (ILC2s) among hematopoietic cells.
PubMed News (NIH) 10/18/2019
Contributors : Laura C Bohorquez ; Joana de Sousa ; Transito Garcia-Garcia ; Martijs J Jonker ; Marie-Françoise Noirot ; Michael Lalk ; Leendert W Hamoen Series Type : Expression profiling by high throughput sequencing Organism : Bacillus subtilis. The conserved WhiA protein family is present in most Gram-positive bacteria and plays a role in cell division.
PubMed News (NIH) 10/18/2019
Contributors : Rick Maizels ; Alasdair Ivens ; Danielle Smyth Series Type : Expression profiling by array Organism : Mus musculus. We have found that macrophage migration inhibitory factor (MIF) is essential for the development of effective immunity to the intestinal helminth Heligmosomoides polygyrus, even following vaccination which induces sterile immunity in wild-type mice.
PubMed News (NIH) 10/18/2019
Contributors : Bernhard Grimm ; Andreas S Richter Series Type : Expression profiling by high throughput sequencing Organism : Arabidopsis thaliana. Transcriptome profile of Arabidopsis wild-type (Col-0) and mutants of the plastidic retrograde signalling pathway (gun1-1,gun4-1, gun5-1) germinated in the presence of 5µM Norflurazon for 5d in continious light (100µE).
PubMed News (NIH) 10/18/2019
Contributors : Eric Engelbrecht ; Michel V Levesque ; Liqun He ; Michael Vanlandewijck ; Christer Betsholtz ; Timothy Hla Series Type : Genome binding/occupancy profiling by high throughput sequencing ; Expression profiling by high throughput sequencing Organism : Mus musculus. Despite the medical importance of G protein-coupled receptors (GPCRs), in vivo cellular heterogeneity of GPCR signaling and downstream transcriptional responses are not understood.

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